Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015927448.1_cds_XP_016475239.1_67190
CDS Infomation

[gene=LOC107796933] [db_xref=GeneID:107796933] [protein=pentatricopeptide repeat-containing protein At5g56310-like] [protein_id=XP_016475239.1] [location=36927..38384] [gbkey=CDS]
Sequence

ATGACAAGAAGGAGGTTCTCAATAATGGTCCCGCCAAAATGGAACCTCTTCAATTTCAGG
GGACTCCATTGCAGGCACCTCTGTACTATCACCGTCCGTCCTTATTCTCCTCCACGACTA
TCTCTTCTAGCGGACCAATGCACTTCAATGCACCAACTCAAGCAAATCCATGCCCAAATG
ATCATCACTGCCCGTATCCACGACAATTATGCCGCCAGCCGCTTACTATCCTTCTGTGCT
CTGTCGGAATCAGGCAACCTTTCTTATGCCTTAAAACTTTTTGATAGTATCAACAAACCC
AATTCATTTATGTGGAACACTCTCATTAGAGCTCAAGCTGGTAGCTCAACTCCCCAGCAA
GCCTTGCTTCGTTATGTAAAAATGCGAAGGCTTTGCGTCACTCCCGGCAAACATACATTC
CCTTTTGTACTGAAAGCTTGTTCCAACTTGACGTGTATTTATGTTGGTAGACAAGTGCAT
TGCCATGTCATTAAATTCGGGTTGGATTTAGATTTGCATGTTGTTAATGGCTTGATCAGA
GTGTATTCTGTTTGTCGTGTATTAAAGGATGCACGAAGAGTGTTTGATGAAATTACTGAG
CGAAATTTGAGTATTTGGACGACGATGATTTGTGGGTTTGCACAGAATGATAGATATAAT
GACGCTATTCAGTTGTTTGAGCGTCTGCTTGCGGATGGAATTGAGCCCAACGGAGCCACC
TTGGCTTCTGTTTTGTCAGCTTGTGCTCAGTCGGATAGTTTGCAATTAGGAGAGCAGATT
CACGTATATATGGATGAAAAAGGAATAAAATTTGGAGTGATTCTTGGCACGGCATTGGTG
AACATGTACGCAAAGAACGGTGCCATAGTAGAGGCAAAGAATTGTTTTAGTGGTATGCGA
GAAAGGAATATTGCAACTTGGAATGCAATGATTTGCGGTTTAGCTGCTCATGGGCATGCA
AAAGAAGCAATTAACTTCTTTAAGAAGCTAGAACAAGAAAAGGTGAAGCCAAATGATATT
ACACTAGTTGGGGTTCTATCAGCATGCTGCCATGCCGGATTGTTTGACTATGGTGAAGGA
ATATTTCACTCCATGAAAGAGTTGTATGGTGTAGAGCCCAAGATTGAGCATTATGGATGC
GTGGTTGACATTCTTGGGCGTAATGGGAAACTGCTAGAAGCTGAACAGCTCATAAGAGGA
ATGGTTTTGAAGGCTGACGTGGTTATCTGGGGATCCTTATTACATGCATGTCAGAGCCAT
GGAAACATAGATATTGCAGAACGAGTTGTGAAAGAAATTCTGCTTTTGAATCCAAATAGT
CATGGCGTTTATGTTGTTTTATCTAATATGTATGCAGAGGCTGGAAGATGGGAGGATGTG
GTAAAACTAAGGAAGCAGATGAAGGAAGGAAGCTTAAAGAAAACACCTGGTTGGAGCCTT
GTAAATGGTGCTACATAA

Peptide Sequence

PEP ID

XP_016475239.1
PEP Infomation

PREDICTED: pentatricopeptide repeat-containing protein At5g56310-like [Nicotiana tabacum]
Sequence

MTRRRFSIMVPPKWNLFNFRGLHCRHLCTITVRPYSPPRLSLLADQCTSMHQLKQIHAQM
IITARIHDNYAASRLLSFCALSESGNLSYALKLFDSINKPNSFMWNTLIRAQAGSSTPQQ
ALLRYVKMRRLCVTPGKHTFPFVLKACSNLTCIYVGRQVHCHVIKFGLDLDLHVVNGLIR
VYSVCRVLKDARRVFDEITERNLSIWTTMICGFAQNDRYNDAIQLFERLLADGIEPNGAT
LASVLSACAQSDSLQLGEQIHVYMDEKGIKFGVILGTALVNMYAKNGAIVEAKNCFSGMR
ERNIATWNAMICGLAAHGHAKEAINFFKKLEQEKVKPNDITLVGVLSACCHAGLFDYGEG
IFHSMKELYGVEPKIEHYGCVVDILGRNGKLLEAEQLIRGMVLKADVVIWGSLLHACQSH
GNIDIAERVVKEILLLNPNSHGVYVVLSNMYAEAGRWEDVVKLRKQMKEGSLKKTPGWSL
VNGAT

Transcript Sequence

Gene sequence data has not been registered.